Purification of DNA from CsCl fractions

The following protocol assumes a fraction of 300ul. If other size fractions are collected, adjust volumes accordingly.

  • To each 300ul fraction add
    • 600 ul SIP buffer B
    • 1 ul Glycogen
  • Vortex well
  • Add 600 ul Isopropanol and vortex
  • Spin @ 14k rpm for 30 minutes
  • Wash pellet with 70% ethanol and dry
  • Take up pellet in DI or TE buffer

When I tried this with some Lambda-HindIII marker DNA, I had an average of 95% recovery using this precipitation protocol.

SIP Buffer B

  • 50 mM Tris
  • 15 mM EDTA pH 8.0
 
community_analsyis/purification_of_dna_from_cscl_fractions.txt · Last modified: 2008/11/18 17:43 by bwawrik